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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12544916 chr8:13475151 C/G KIAA1967 chr8:22462257-22477981:+ 0.53 6.52 2.19E-10 Box Plot
BLCA rs12544916 chr8:13475151 C/G PPP2R2A chr8:26149007-26230196:+ 0.48 6.25 1.12E-9 Box Plot
BLCA rs12544916 chr8:13475151 C/G TNKS chr8:9413424-9639856:+ 0.42 6.26 1.02E-9 Box Plot
BLCA rs12544916 chr8:13475151 C/G VPS37A chr8:17104080-17159936:+ 0.5 6.4 4.53E-10 Box Plot
BLCA rs12544916 chr8:13475151 C/G XPO7 chr8:21777182-21864096:+ 0.51 6.29 8.51E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G CDCA2 chr8:25316513-25365436:+ 0.38 6.41 4.37E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G CHMP7 chr8:23101150-23119513:+ 0.56 6.97 1.35E-11 Box Plot
BLCA rs12549278 chr8:16242981 A/G DCTN6 chr8:30013813-30041156:+ 0.55 6.38 5.01E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G ESCO2 chr8:27629466-27670157:+ 0.39 6.42 3.94E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G FAM160B2 chr8:21946670-21962409:+ 0.45 6.12 2.34E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G FZD3 chr8:28351722-28431785:+ 0.51 6.19 1.52E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G GTF2E2 chr8:30435835-30515768:- 0.53 6.28 8.93E-10 Box Plot
BLCA rs12549278 chr8:16242981 A/G INTS9 chr8:28625178-28747759:- 0.54 6.14 2.11E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G KCTD9 chr8:25285363-25315992:- 0.42 6.04 3.56E-9 Box Plot
BLCA rs12549278 chr8:16242981 A/G KIAA1967 chr8:22462257-22477981:+ 0.56 6.59 1.47E-10 Box Plot